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Estimating animal abundance: open populations

Newman, Buckland, Morgan, King, Borchers, Cole, Besbeas, Gimenez and Thomas Springer Publishers

  • Home
  • Chapter 1 Introduction (no code)
  • Chapter 2 Matrices as building blocks (no code)
  • Chapter 3: State-space models
  • Chapter 4: Fitting state-space models
  • Chapter 5 Model formulation and evaluation
  • Chapter 6: Modelling population dynamics using closed-population abundance estimates
  • Chapter 7 Survival estimation from mark-re-encounter data
  • Chapter 9: Integrated methods
  • Chapter 10 Concluding remarks (no code)

Chapter 5 Model formulation and evaluation

Section 5.2.2 Derivative matrix and symbolic rank

Example 1 closed population

  • Human readable
  • Maple worksheet

Example 2 Cormack-Jolly-Seber example

  • Human readable
  • Maple worksheet

Section 5.3 Parameter redundancy in state-space models

Example 3 BRS matrix model example

  • Human readable
  • Maple worksheet

Example 4 BAMS (survival, movement, age, birth) example

  • Human readable
  • Maple worksheet