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Information for current students at the School of Biology

Biology Online Module Handbook

BL4266 Conservation Research Methods

(BL4266 online module handbook version 49)

cover image

image: An individually marked redshank - when animals become individuals we can estimate survival rates and population estimates accurately

The conservation of animal and plant populations relies initially on information of population sizes and trends. This information can only be collected by fieldwork. This module teaches the basic field techniques that underpin the monitoring of populations. Each week the theory behind a different technique is introduced, then the technique is practiced in the field, and finally data collected by the technique are analysed and discussed in a workshop at the end of the week, so that a full understanding of a technique and its proper application is gained. The module ends with students carrying out a project applying and integrating the techniques they have learnt.*

Credits: 15*

Semester: 1

Module Organiser
Prof Will Cresswell
wrlc@st-andrews.ac.uk
01334 463010
Pre-requisite Modules:
Before taking this module you must pass BL3309*
Anti-requisite Modules:
*
Post-requisite Modules:
*
Additional Module Information:


Biology Teaching Office:
Level 2, Biomolecular Sciences Building, University of St Andrews, North Haugh, St Andrews, Fife KY16 9ST

Email: bioteach@st-andrews.ac.uk      Phone: +44 (0)1334 46 3602 or 3566

BL4266: Timetable

Legend (not all modules have every event type):
lecture
tutorial
workshop
practical
other

Semester 1: Week 1

DATE & TIMEVENUESTAFFEVENT
Monday
11-09-2023
10:00 to 11:00
Bute Building
C26
Dr Andrew Blight
-
Lecture L1: Line transect sampling: an introduction
2023-4_BL4266_L1
Tuesday
12-09-2023
09:00 to 11:00
Other
East Sands (grass by beach)
Dr Andrew Blight
-
Practical P1: Line transect survey (field practical)
2023-4_BL4266_P1
Friday
15-09-2023
09:00 to 11:00
Other
Younger Hall: Seminar Room 4
Dr Andrew Blight
-
Workshop W1: Line transect data analysis (data analysis practical)
2023-4_BL4266_W1
Morning session
Friday
15-09-2023
14:00 to 16:00
Dyers Brae
Seminar Room
Dr Andrew Blight
-
Workshop W2: Line transect data analysis (data analysis practical)
2023-4_BL4266_W2
Afternoon session

Semester 1: Week 2

DATE & TIMEVENUESTAFFEVENT
Monday
18-09-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Prof Will Cresswell
-
Lecture L2: Counts: variation between observers and techniques; assessing necessary sampling effort, confidence limits
2023-4_BL4266_L2
Tuesday
19-09-2023
12:00 to 14:30
Other
Eden Estuary
Prof Will Cresswell
-
Practical P2: Field trip to Eden Estuary - learning field counting methods
2023-4_BL4266_P2
Friday
22-09-2023
11:00 to 13:00
Bute Building
C5
Prof Will Cresswell
-
Workshop W3: Analysis of field data - modelling count data
2023-4_BL4266_W3

Semester 1: Week 3

DATE & TIMEVENUESTAFFEVENT
Monday
25-09-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Dr Andrew Blight
-
Lecture L3: Mark-recapture: an introduction
2023-4_BL4266_L3
Thursday
28-09-2023
11:00 to 13:00
Dyers Brae
Seminar Room
Dr Andrew Blight
-
Workshop W4: Mark-recapture estimation of population size I (data analysis practical)
2023-4_BL4266_W4
Morning session
Thursday
28-09-2023
13:00 to 15:00
Other
Old Burgh School- 108- Lumsden Seminar Room 1
Dr Andrew Blight
-
Workshop W5: Mark-recapture estimation of population size II (data analysis practical)
2023-4_BL4266_W5
Afternoon session

Semester 1: Week 4

DATE & TIMEVENUESTAFFEVENT
Monday
02-10-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Prof Will Cresswell
-
Lecture L4: Behavioural sampling - focal and continuous techniques
2023-4_BL4266_L4
Tuesday
03-10-2023
12:00 to 14:30
Other
Eden Estuary
Prof Will Cresswell
-
Practical P3: Field trip to Eden Estuary - learning field behavioural sampling methods
2023-4_BL4266_P3
Friday
06-10-2023
11:00 to 13:00
Bute Building
C5
Prof Will Cresswell
-
Workshop W6: Analysis of field data - modelling behavioural data
2023-4_BL4266_W6

Semester 1: Week 5

DATE & TIMEVENUESTAFFEVENT
Monday
09-10-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Prof Will Cresswell
-
Lecture L5: Sampling design: random, stratified sampling, biases
2023-4_BL4266_L5
Tuesday
10-10-2023
08:30 to 10:00
Other
St Andrews Castle Beach
Prof Will Cresswell
-
Practical P4: Field trip St Andrews rocky shore below the Castle
2023-4_BL4266_P4
Friday
13-10-2023
11:00 to 13:00
Bute Building
C5
Prof Will Cresswell
-
Workshop W7: Analysis of field data - stratified sampling and bootstrapping
2023-4_BL4266_W7

Semester 1: Week 7

DATE & TIMEVENUESTAFFEVENT
Monday
23-10-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Dr Andrew Blight
-
Lecture L6: Life tables and survival analysis
2023-4_BL4266_L6
Thursday
26-10-2023
09:00 to 11:00
Bute Building
C5
Dr Andrew Blight
-
Workshop W8: Life table analysis (data analysis practical)
2023-4_BL4266_W8
Thursday session
Friday
27-10-2023
09:00 to 11:00
Other
Younger Hall: Seminar Room 4
Dr Andrew Blight
-
Workshop W9: Mark-recapture estimation of survival rates (data analysis practical)
2023-4_BL4266_W9
Friday session

Semester 1: Week 8

DATE & TIMEVENUESTAFFEVENT
Monday
30-10-2023
10:00 to 11:00
St Mary's College
Lecture Room 3
Prof Will Cresswell
Dr Andrew Blight
Workshop W10: Project proposal meeting
2023-4_BL4266_W10
Thursday
02-11-2023
10:00 to 13:00
Bute Building
C5
Prof Will Cresswell
Dr Andrew Blight
Other O1: Project proposal presentations
2023-4_BL4266_O1

Semester 1: Week 11

DATE & TIMEVENUESTAFFEVENT
Thursday
23-11-2023
14:00 to 16:00
Dyers Brae
Seminar Room
Prof Will Cresswell
Dr Andrew Blight
Workshop W11: Project analysis session and troubleshooting
2023-4_BL4266_W11
Data Sources: information in this online module handbook is gathered from several sources.
Small footnote marks beside content, or by section titles indicate the source.
* University of St Andrews Module Catalogue
School of Biology Symbiosis Database (module organisers only)
University of St Andrews MMS (St Andrews users only)

BL4266: Assessment

Coursework = 100%*

The following related information applies to all Biology modules:

School of Biology Marking Criteria: See JH booklet info (st-andrews.ac.uk) 
Late submission of continuous assessment work:

All late submissions of coursework that do not require electronic submission should be made via the Biology Teaching Office, Level 2, BMS Building, North Haugh.
Exam details: See School of Biology UG Handbook JH booklet info (st-andrews.ac.uk)  : All Biology exams will be conducted online for 2022-23.
Exam timetable: See Timetables - Exams - University of St Andrews (st-andrews.ac.uk) 
Expected attendance: See JH booklet info (st-andrews.ac.uk)  for detailed attendance requirements.
Good Academic Practice & Avoiding Academic Misconduct: See JH booklet info (st-andrews.ac.uk)
University Student Handbook: University Student Handbook
School and University regulations in the School and University Undergraduate Handbook relating to absence reporting, penalties and rules for late submission of work, extensions for coursework, return of coursework, S-coding, good academic practice and Academic Alerts.: JH booklet info (st-andrews.ac.uk)
University Student Handbook
Data Sources: information in this online module handbook is gathered from several sources.
Small footnote marks beside content, or by section titles indicate the source.
* University of St Andrews Module Catalogue
School of Biology Symbiosis Database (module organisers only)
University of St Andrews MMS (St Andrews users only)

Who to ask

(Information in this section applies to all Biology Modules)

Before contacting staff, students should check the content of the Biology Undergraduate Handbook, the module handbook and specific task instructions.

Questions about Contact
General teaching matters Biology Teaching Office ( bioteach@st-andrews.ac.uk )
Rescheduled or cancelled events Check your University email
Lecture or practical content The lecturer who presented the material
Completing assessed practical assignments The lecturer who set the assignment
Completing assessments Module Organiser (Prof Will Cresswell wrlc@st-andrews.ac.uk)
Marking on continuous assessment The Demonstrator or Module Organiser (Prof Will Cresswell wrlc@st-andrews.ac.uk)
Marking on exams Module Organiser (Prof Will Cresswell wrlc@st-andrews.ac.uk)
Rearranging practical days
Module Organiser (Prof Will Cresswell wrlc@st-andrews.ac.uk)
Absence and/or extensions Module Organiser (Prof Will Cresswell wrlc@st-andrews.ac.uk)

and the Biology Teaching Office ( bioteach@st-andrews.ac.uk )

Difficulties with academic progress which impact more than one module:

Year Coordinator

See School of Biology UG Handbook for list:
JH booklet info (st-andrews.ac.uk)

Overall performance, progress or future directions:

Advisor of Studies

Disability:

Disability Coordinator ( biodisabilities@st-andrews.ac.uk )

For advice and support on any issue e.g. academic, financial, international, personal or health matters, or if you are unsure of who to go to for help:

Advice & Support Centre

Address: 79 North Street, St Andrews

Email: theasc@st-andrews.ac.uk

Web: https://www.standrews.ac.uk/ask-a-question/

Tel: 01334 462020

University assistance with urgent matters out of office hours:

Tel: 01334 476161

Web: https://www.st-andrews.ac.uk/students/advice/counselling/incrisis/

Biology Teaching Office:

We are happy to hear from you about teaching matters. The School of Biology Teaching Office is open Monday to Friday 09.00 - 13.00 and 14.00 - 17.00. School of Biology staff will respond to your emails during these hours. Our team will provide a response to you within three working days.

Biology Teaching Office (Level 2), University of St Andrews, Biomolecular Sciences Building, North Haugh, St Andrews, Fife KY16 9ST

Email: bioteach@st-andrews.ac.uk

Tel: 01334 46 3602 or 3566

BL4266: Contributing Staff

Prof Will Cresswell
(Module Organiser)

Professor of Biologywrlc@st-andrews.ac.uk
Dr Andrew BlightLecturerajb34@st-andrews.ac.uk
Prof Will Cresswell
(Module Organiser)
Professor of Biologywrlc@st-andrews.ac.uk
Data Sources: information in this online module handbook is gathered from several sources.
Small footnote marks beside content, or by section titles indicate the source.
* University of St Andrews Module Catalogue
School of Biology Symbiosis Database (module organisers only)
University of St Andrews MMS (St Andrews users only)

BL4266: Learning Outcomes

Students completing module BL4266 successfully should be able to:

  • Understand the process of designing and implementing an efficient conservation-based assessment of key population parameters.
  • Use basic specific skills necessary for answering a range of conservation research questions to do with population size
  • Evaluate whether methods are appropriate and efficient to address conservation research questions
  • Analyse pilot data efficiently within the context of determining the limitations of the pilot data and the methods used to collect it so that they can both then be improved.
  • Present and fully justify the methods chosen to most efficiently answer a conservation research question.
Data Sources: information in this online module handbook is gathered from several sources.
Small footnote marks beside content, or by section titles indicate the source.
* University of St Andrews Module Catalogue
School of Biology Symbiosis Database (module organisers only)
University of St Andrews MMS (St Andrews users only)

BL4266: Acquired Skills

Practical Skills

  • Field sampling methods (Invertebrates)
  • Field sampling methods (Vertebrates)
  • Fieldwork safety awareness
  • Species identification (Vertebrates)
  • Sustainability related practical skills

Transferable Skills

  • Group discussion - leading
  • Group discussion - participating
  • Short individual presentation on project idea (up to 15 min)
  • Short informal presentation (using PowerPoint or not)
  • "Full" practical write-up (Intro, Methods, Results, Discussion)
  • Project report
  • Research proposal
  • Response to comments on proposal
  • Critically evaluating sources/information
  • Finding information on the web
  • Finding literature
  • Referencing
  • Sourcing figures/tables
  • Computer programming
  • Generating questions
  • Peer assessment
  • Problem-solving questions
  • ANOVA/Kruskal-Wallis test
  • Biodiversity analysis
  • Calculations/equations
  • Chi-square test
  • Data analysis
  • Data analysis (depending on project)
  • Data presentation
  • Deal with outliers
  • Decimal places
  • Descriptive statistics
  • Distinguish different types of data
  • Draw a line of best fit
  • Generalised Linear Models
  • Handling big data
  • Interpolation
  • Linear regression
  • Logarithms
  • Non-linear fit
  • Other mathematical models
  • Pearson/Spearman rank correlation
  • Produce graphs/figures
  • Produce tables
  • Scaling
  • Shapiro-Wilk test for normality
  • SI units
  • Significant figures
  • Survival analysis
  • t-test/Wilcoxon test
  • Two-way ANOVA
  • Use Excel
  • Use other data analysis software
  • Use R or R Studio
  • Lab or field notebook
  • Critiquing experimental design
  • Designing experiments
  • Sustainability Related Skills
  • Generate class dataset
  • Managing a team
  • Organising group work
  • Working in pairs/small groups
Data Sources: information in this online module handbook is gathered from several sources.
Small footnote marks beside content, or by section titles indicate the source.
* University of St Andrews Module Catalogue
School of Biology Symbiosis Database (module organisers only)
University of St Andrews MMS (St Andrews users only)

Policies

(Information in this section applies to all Biology Modules)

  • The procedures and regulations followed by the School of Biology are outlined in the University Handbook and in the School of Biology UG handbook  JH booklet info (st-andrews.ac.uk) 
  • All coursework associated with the module must be completed and submitted by its due date.
  • Specific School regulations relating to absence reporting, penalties and rules for late submission of work, extensions for coursework, return of coursework, S-coding, Good Academic Practice and Academic Alert are stated in the School of Biology UG hand book JH booklet info (st-andrews.ac.uk)  and students are required to carefully read these regulations.
  • Students are also referred to the University Handbook, available at: http://www.st-andrews.ac.uk/studenthandbook/